Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd1Q99J36 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd1Q99J36 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd1Q99J36 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd1Q99J36 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd1Q99J36 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Thumpd1Q99J36 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd1Q99J36 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd1Q99J36 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Thumpd1Q99J36 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Rps24-207ENSMUST00000224568 714 ntBASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Thumpd1Q99J36 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Thumpd1Q99J36 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Gm14117-201ENSMUST00000122417 843 ntBASIC16.39■□□□□ 0.21
Thumpd1Q99J36 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Thumpd1Q99J36 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Gm27801-201ENSMUST00000184174 223 ntBASIC16.38■□□□□ 0.21
Thumpd1Q99J36 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.38■□□□□ 0.21
Thumpd1Q99J36 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Thumpd1Q99J36 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Gm11421-201ENSMUST00000122124 294 ntBASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Gm8969-201ENSMUST00000199694 526 ntBASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Thumpd1Q99J36 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Thumpd1Q99J36 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms