Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col20a1Q923P0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col20a1Q923P0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col20a1Q923P0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col20a1Q923P0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Col20a1Q923P0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col20a1Q923P0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col20a1Q923P0 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.75■■□□□ 1.07
Col20a1Q923P0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col20a1Q923P0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col20a1Q923P0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col20a1Q923P0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col20a1Q923P0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Col20a1Q923P0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col20a1Q923P0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Col20a1Q923P0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col20a1Q923P0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Col20a1Q923P0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.74■■□□□ 1.07
Col20a1Q923P0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.74■■□□□ 1.07
Col20a1Q923P0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col20a1Q923P0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Col20a1Q923P0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Col20a1Q923P0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.74■■□□□ 1.07
Col20a1Q923P0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col20a1Q923P0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.73■■□□□ 1.07
Col20a1Q923P0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col20a1Q923P0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col20a1Q923P0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col20a1Q923P0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col20a1Q923P0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col20a1Q923P0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col20a1Q923P0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Col20a1Q923P0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col20a1Q923P0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Col20a1Q923P0 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.73■■□□□ 1.07
Col20a1Q923P0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Col20a1Q923P0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col20a1Q923P0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col20a1Q923P0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col20a1Q923P0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col20a1Q923P0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col20a1Q923P0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col20a1Q923P0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col20a1Q923P0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col20a1Q923P0 Gm6576-201ENSMUST00000169678 883 ntBASIC21.72■■□□□ 1.07
Col20a1Q923P0 Gm38285-201ENSMUST00000192928 922 ntBASIC21.72■■□□□ 1.07
Col20a1Q923P0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col20a1Q923P0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.72■■□□□ 1.07
Col20a1Q923P0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Col20a1Q923P0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col20a1Q923P0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col20a1Q923P0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col20a1Q923P0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col20a1Q923P0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col20a1Q923P0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col20a1Q923P0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col20a1Q923P0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col20a1Q923P0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col20a1Q923P0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col20a1Q923P0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Col20a1Q923P0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
Col20a1Q923P0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Col20a1Q923P0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col20a1Q923P0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col20a1Q923P0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col20a1Q923P0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col20a1Q923P0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.7■■□□□ 1.06
Col20a1Q923P0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Col20a1Q923P0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.7■■□□□ 1.06
Col20a1Q923P0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.7■■□□□ 1.06
Col20a1Q923P0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Col20a1Q923P0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.7■■□□□ 1.06
Col20a1Q923P0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col20a1Q923P0 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.69■■□□□ 1.06
Col20a1Q923P0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Col20a1Q923P0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col20a1Q923P0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col20a1Q923P0 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.69■■□□□ 1.06
Col20a1Q923P0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col20a1Q923P0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col20a1Q923P0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col20a1Q923P0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col20a1Q923P0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col20a1Q923P0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Mtag2-201ENSMUST00000058665 714 ntBASIC21.68■■□□□ 1.06
Col20a1Q923P0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col20a1Q923P0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col20a1Q923P0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms