Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Gm27011-201ENSMUST00000182352 972 ntBASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb20Q91XZ9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Gm12527-201ENSMUST00000117967 564 ntBASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Gm44549-201ENSMUST00000208351 577 ntBASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb20Q91XZ9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb20Q91XZ9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb20Q91XZ9 Gm20760-201ENSMUST00000179197 648 ntBASIC17.65■□□□□ 0.42
Pcdhb20Q91XZ9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb20Q91XZ9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb20Q91XZ9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb20Q91XZ9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb20Q91XZ9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb20Q91XZ9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb20Q91XZ9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb20Q91XZ9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb20Q91XZ9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Pcdhb20Q91XZ9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb20Q91XZ9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdhb20Q91XZ9 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.64■□□□□ 0.41
Pcdhb20Q91XZ9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb20Q91XZ9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb20Q91XZ9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb20Q91XZ9 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC17.64■□□□□ 0.41
Pcdhb20Q91XZ9 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb20Q91XZ9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb20Q91XZ9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb20Q91XZ9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb20Q91XZ9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb20Q91XZ9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Gm2559-201ENSMUST00000201323 363 ntBASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 AC153961.1-201ENSMUST00000217760 385 ntBASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb20Q91XZ9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb20Q91XZ9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb20Q91XZ9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb20Q91XZ9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb20Q91XZ9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdhb20Q91XZ9 Gm10653-202ENSMUST00000139570 835 ntBASIC17.62■□□□□ 0.41
Pcdhb20Q91XZ9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Pcdhb20Q91XZ9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb20Q91XZ9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb20Q91XZ9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb20Q91XZ9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb20Q91XZ9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.62■□□□□ 0.41
Pcdhb20Q91XZ9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb20Q91XZ9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Gm22325-201ENSMUST00000158904 308 ntBASIC17.61■□□□□ 0.41
Pcdhb20Q91XZ9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms