Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm13234-201ENSMUST00000120010 747 ntBASIC16.35■□□□□ 0.21
Pcdhga3Q91XY5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.35■□□□□ 0.21
Pcdhga3Q91XY5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhga3Q91XY5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhga3Q91XY5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdhga3Q91XY5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhga3Q91XY5 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.35■□□□□ 0.21
Pcdhga3Q91XY5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga3Q91XY5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga3Q91XY5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga3Q91XY5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga3Q91XY5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhga3Q91XY5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga3Q91XY5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga3Q91XY5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga3Q91XY5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga3Q91XY5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Pcdhga3Q91XY5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Pcdhga3Q91XY5 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhga3Q91XY5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Gm13146-201ENSMUST00000118508 780 ntBASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhga3Q91XY5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Gm5874-201ENSMUST00000096101 508 ntBASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhga3Q91XY5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms