Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgc3Q91XX1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhgc3Q91XX1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Pcdhgc3Q91XX1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhgc3Q91XX1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhgc3Q91XX1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Pcdhgc3Q91XX1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.33■□□□□ 0.37
Pcdhgc3Q91XX1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhgc3Q91XX1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.33■□□□□ 0.37
Pcdhgc3Q91XX1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgc3Q91XX1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgc3Q91XX1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.33■□□□□ 0.36
Pcdhgc3Q91XX1 Golgb1-201ENSMUST00000023534 498 ntBASIC17.33■□□□□ 0.36
Pcdhgc3Q91XX1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgc3Q91XX1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgc3Q91XX1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgc3Q91XX1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgc3Q91XX1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Gm13241-201ENSMUST00000094493 780 ntBASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgc3Q91XX1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhgc3Q91XX1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgc3Q91XX1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms