Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.04■□□□□ 0.64
Pcdhb17Q91VD8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb17Q91VD8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb17Q91VD8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb17Q91VD8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb17Q91VD8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb17Q91VD8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb17Q91VD8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb17Q91VD8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb17Q91VD8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Gm22325-201ENSMUST00000158904 308 ntBASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Rab3c-203ENSMUST00000224180 967 ntBASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb17Q91VD8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb17Q91VD8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb17Q91VD8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb17Q91VD8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb17Q91VD8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb17Q91VD8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Pcdhb17Q91VD8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.02■□□□□ 0.64
Pcdhb17Q91VD8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.02■□□□□ 0.64
Pcdhb17Q91VD8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb17Q91VD8 Gm4968-201ENSMUST00000071458 858 ntBASIC19.02■□□□□ 0.64
Pcdhb17Q91VD8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.02■□□□□ 0.63
Pcdhb17Q91VD8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb17Q91VD8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb17Q91VD8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb17Q91VD8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 Gm5408-201ENSMUST00000197998 747 ntBASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb17Q91VD8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Pcdhb17Q91VD8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdhb17Q91VD8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhb17Q91VD8 Gm37744-201ENSMUST00000194616 1590 ntBASIC18.98■□□□□ 0.63
Pcdhb17Q91VD8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhb17Q91VD8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.98■□□□□ 0.63
Pcdhb17Q91VD8 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC18.98■□□□□ 0.63
Pcdhb17Q91VD8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb17Q91VD8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb17Q91VD8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb17Q91VD8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb17Q91VD8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb17Q91VD8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb17Q91VD8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb17Q91VD8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb17Q91VD8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb17Q91VD8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms