Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
StrcQ8VIM6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.28■■□□□ 1.16
StrcQ8VIM6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
StrcQ8VIM6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
StrcQ8VIM6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
StrcQ8VIM6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
StrcQ8VIM6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
StrcQ8VIM6 Gm37805-201ENSMUST00000192612 1094 ntBASIC22.27■■□□□ 1.15
StrcQ8VIM6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
StrcQ8VIM6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
StrcQ8VIM6 Gm43353-201ENSMUST00000199224 1295 ntBASIC22.26■■□□□ 1.15
StrcQ8VIM6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
StrcQ8VIM6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
StrcQ8VIM6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
StrcQ8VIM6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
StrcQ8VIM6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
StrcQ8VIM6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC22.25■■□□□ 1.15
StrcQ8VIM6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
StrcQ8VIM6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.25■■□□□ 1.15
StrcQ8VIM6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
StrcQ8VIM6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
StrcQ8VIM6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
StrcQ8VIM6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC22.24■■□□□ 1.15
StrcQ8VIM6 Gm4217-201ENSMUST00000182243 1002 ntBASIC22.24■■□□□ 1.15
StrcQ8VIM6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
StrcQ8VIM6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
StrcQ8VIM6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
StrcQ8VIM6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.24■■□□□ 1.15
StrcQ8VIM6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
StrcQ8VIM6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
StrcQ8VIM6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC22.24■■□□□ 1.15
StrcQ8VIM6 Gm27463-201ENSMUST00000183569 57 ntBASIC22.24■■□□□ 1.15
StrcQ8VIM6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC22.24■■□□□ 1.15
StrcQ8VIM6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
StrcQ8VIM6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
StrcQ8VIM6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
StrcQ8VIM6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC22.23■■□□□ 1.15
StrcQ8VIM6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
StrcQ8VIM6 AC159205.3-201ENSMUST00000224614 874 ntBASIC22.23■■□□□ 1.15
StrcQ8VIM6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
StrcQ8VIM6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
StrcQ8VIM6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
StrcQ8VIM6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
StrcQ8VIM6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
StrcQ8VIM6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
StrcQ8VIM6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
StrcQ8VIM6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
StrcQ8VIM6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
StrcQ8VIM6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
StrcQ8VIM6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
StrcQ8VIM6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
StrcQ8VIM6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
StrcQ8VIM6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
StrcQ8VIM6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
StrcQ8VIM6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
StrcQ8VIM6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
StrcQ8VIM6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
StrcQ8VIM6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
StrcQ8VIM6 Gm38027-201ENSMUST00000192315 235 ntBASIC22.21■■□□□ 1.15
StrcQ8VIM6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
StrcQ8VIM6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
StrcQ8VIM6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
StrcQ8VIM6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
StrcQ8VIM6 Gm14859-201ENSMUST00000117752 357 ntBASIC22.2■■□□□ 1.14
StrcQ8VIM6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
StrcQ8VIM6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC22.2■■□□□ 1.14
StrcQ8VIM6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
StrcQ8VIM6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
StrcQ8VIM6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
StrcQ8VIM6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
StrcQ8VIM6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
StrcQ8VIM6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
StrcQ8VIM6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
StrcQ8VIM6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
StrcQ8VIM6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
StrcQ8VIM6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
StrcQ8VIM6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
StrcQ8VIM6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
StrcQ8VIM6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
StrcQ8VIM6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
StrcQ8VIM6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
StrcQ8VIM6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
StrcQ8VIM6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
StrcQ8VIM6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
StrcQ8VIM6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
StrcQ8VIM6 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms