Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rab40bQ8VHP8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.55■□□□□ 0.24
Rab40bQ8VHP8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rab40bQ8VHP8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Rab40bQ8VHP8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rab40bQ8VHP8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Gm14117-201ENSMUST00000122417 843 ntBASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab40bQ8VHP8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab40bQ8VHP8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab40bQ8VHP8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab40bQ8VHP8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.52■□□□□ 0.24
Rab40bQ8VHP8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rab40bQ8VHP8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab40bQ8VHP8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab40bQ8VHP8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab40bQ8VHP8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab40bQ8VHP8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab40bQ8VHP8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab40bQ8VHP8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab40bQ8VHP8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rab40bQ8VHP8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rab40bQ8VHP8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rab40bQ8VHP8 Fst-202ENSMUST00000223640 2612 ntBASIC16.51■□□□□ 0.23
Rab40bQ8VHP8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40bQ8VHP8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40bQ8VHP8 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.51■□□□□ 0.23
Rab40bQ8VHP8 Gm27801-201ENSMUST00000184174 223 ntBASIC16.51■□□□□ 0.23
Rab40bQ8VHP8 Rps24-207ENSMUST00000224568 714 ntBASIC16.51■□□□□ 0.23
Rab40bQ8VHP8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab40bQ8VHP8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.51■□□□□ 0.23
Rab40bQ8VHP8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.51■□□□□ 0.23
Rab40bQ8VHP8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rab40bQ8VHP8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Gm11421-201ENSMUST00000122124 294 ntBASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab40bQ8VHP8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab40bQ8VHP8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms