Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lmcd1Q8VEE1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lmcd1Q8VEE1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lmcd1Q8VEE1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lmcd1Q8VEE1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 Mir5130-201ENSMUST00000175160 84 ntBASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Lmcd1Q8VEE1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Gm17661-201ENSMUST00000170317 270 ntBASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Mir6349-201ENSMUST00000184059 97 ntBASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lmcd1Q8VEE1 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lmcd1Q8VEE1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Gm7284-201ENSMUST00000131667 944 ntBASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lmcd1Q8VEE1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Gm2274-201ENSMUST00000184539 609 ntBASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Gm38285-201ENSMUST00000192928 922 ntBASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Gm7461-201ENSMUST00000058918 827 ntBASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lmcd1Q8VEE1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.58■□□□□ 0.73
Lmcd1Q8VEE1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.58■□□□□ 0.73
Lmcd1Q8VEE1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Lmcd1Q8VEE1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Lmcd1Q8VEE1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lmcd1Q8VEE1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.58■□□□□ 0.72
Lmcd1Q8VEE1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.58■□□□□ 0.72
Lmcd1Q8VEE1 Gm22697-201ENSMUST00000175194 63 ntBASIC19.58■□□□□ 0.72
Lmcd1Q8VEE1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lmcd1Q8VEE1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lmcd1Q8VEE1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lmcd1Q8VEE1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Lmcd1Q8VEE1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lmcd1Q8VEE1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lmcd1Q8VEE1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lmcd1Q8VEE1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lmcd1Q8VEE1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lmcd1Q8VEE1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lmcd1Q8VEE1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms