Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkd2Q8VE28 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
Nkd2Q8VE28 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkd2Q8VE28 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkd2Q8VE28 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nkd2Q8VE28 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkd2Q8VE28 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkd2Q8VE28 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkd2Q8VE28 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Gm8520-201ENSMUST00000186517 868 ntBASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkd2Q8VE28 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Gm5408-201ENSMUST00000197998 747 ntBASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkd2Q8VE28 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Gm22240-201ENSMUST00000175225 82 ntBASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Gm6365-201ENSMUST00000054711 744 ntBASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkd2Q8VE28 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms