Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rprd1aQ8VDS4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rprd1aQ8VDS4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rprd1aQ8VDS4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rprd1aQ8VDS4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rprd1aQ8VDS4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rprd1aQ8VDS4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rprd1aQ8VDS4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rprd1aQ8VDS4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rprd1aQ8VDS4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rprd1aQ8VDS4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rprd1aQ8VDS4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rprd1aQ8VDS4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rprd1aQ8VDS4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rprd1aQ8VDS4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rprd1aQ8VDS4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rprd1aQ8VDS4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.85■□□□□ 0.61
Rprd1aQ8VDS4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rprd1aQ8VDS4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rprd1aQ8VDS4 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.85■□□□□ 0.61
Rprd1aQ8VDS4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.85■□□□□ 0.61
Rprd1aQ8VDS4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.85■□□□□ 0.61
Rprd1aQ8VDS4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rprd1aQ8VDS4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rprd1aQ8VDS4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rprd1aQ8VDS4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rprd1aQ8VDS4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rprd1aQ8VDS4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.85■□□□□ 0.61
Rprd1aQ8VDS4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rprd1aQ8VDS4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms