Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssx2ipQ8VC66 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ssx2ipQ8VC66 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssx2ipQ8VC66 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssx2ipQ8VC66 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssx2ipQ8VC66 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Gm37179-201ENSMUST00000194862 823 ntBASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssx2ipQ8VC66 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx2ipQ8VC66 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 Rarb-207ENSMUST00000225921 2756 ntBASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Ssx2ipQ8VC66 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Gm10033-202ENSMUST00000211874 928 ntBASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ssx2ipQ8VC66 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssx2ipQ8VC66 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssx2ipQ8VC66 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ssx2ipQ8VC66 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssx2ipQ8VC66 Gm13146-201ENSMUST00000118508 780 ntBASIC18.78■□□□□ 0.6
Ssx2ipQ8VC66 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ssx2ipQ8VC66 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.78■□□□□ 0.6
Ssx2ipQ8VC66 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssx2ipQ8VC66 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.78■□□□□ 0.6
Ssx2ipQ8VC66 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ssx2ipQ8VC66 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Ssx2ipQ8VC66 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssx2ipQ8VC66 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssx2ipQ8VC66 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
Ssx2ipQ8VC66 BC021767-201ENSMUST00000126387 1716 ntBASIC18.77■□□□□ 0.6
Ssx2ipQ8VC66 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Ssx2ipQ8VC66 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssx2ipQ8VC66 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.77■□□□□ 0.6
Ssx2ipQ8VC66 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssx2ipQ8VC66 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssx2ipQ8VC66 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssx2ipQ8VC66 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssx2ipQ8VC66 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssx2ipQ8VC66 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.77■□□□□ 0.6
Ssx2ipQ8VC66 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ssx2ipQ8VC66 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms