Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.45■□□□□ 0.54
Vps39Q8R5L3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Vps39Q8R5L3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.44■□□□□ 0.54
Vps39Q8R5L3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps39Q8R5L3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps39Q8R5L3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Vps39Q8R5L3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps39Q8R5L3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps39Q8R5L3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vps39Q8R5L3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
Vps39Q8R5L3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Reep4-203ENSMUST00000226563 1444 ntBASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Gm13146-201ENSMUST00000118508 780 ntBASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vps39Q8R5L3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vps39Q8R5L3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vps39Q8R5L3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vps39Q8R5L3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps39Q8R5L3 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.39■□□□□ 0.53
Vps39Q8R5L3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps39Q8R5L3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms