Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3kbp1Q8R550 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3kbp1Q8R550 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Gm13168-201ENSMUST00000121771 632 ntBASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3kbp1Q8R550 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Sh3kbp1Q8R550 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Sh3kbp1Q8R550 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3kbp1Q8R550 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3kbp1Q8R550 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Gm10252-201ENSMUST00000209541 832 ntBASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Rab3c-203ENSMUST00000224180 967 ntBASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3kbp1Q8R550 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms