Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chrna3Q8R4G9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chrna3Q8R4G9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chrna3Q8R4G9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chrna3Q8R4G9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Chrna3Q8R4G9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.04■□□□□ 0.48
Chrna3Q8R4G9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chrna3Q8R4G9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chrna3Q8R4G9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.04■□□□□ 0.48
Chrna3Q8R4G9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chrna3Q8R4G9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Chrna3Q8R4G9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chrna3Q8R4G9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chrna3Q8R4G9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chrna3Q8R4G9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Gm20049-201ENSMUST00000219950 730 ntBASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chrna3Q8R4G9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 Gm12527-201ENSMUST00000117967 564 ntBASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chrna3Q8R4G9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chrna3Q8R4G9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chrna3Q8R4G9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chrna3Q8R4G9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Chrna3Q8R4G9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chrna3Q8R4G9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chrna3Q8R4G9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chrna3Q8R4G9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chrna3Q8R4G9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Chrna3Q8R4G9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chrna3Q8R4G9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms