Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slf1Q8R3P9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slf1Q8R3P9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slf1Q8R3P9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Slf1Q8R3P9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slf1Q8R3P9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Slf1Q8R3P9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slf1Q8R3P9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slf1Q8R3P9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slf1Q8R3P9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Slf1Q8R3P9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.54■□□□□ 0.56
Slf1Q8R3P9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slf1Q8R3P9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slf1Q8R3P9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slf1Q8R3P9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slf1Q8R3P9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slf1Q8R3P9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slf1Q8R3P9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slf1Q8R3P9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Slf1Q8R3P9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Slf1Q8R3P9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slf1Q8R3P9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slf1Q8R3P9 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.52■□□□□ 0.56
Slf1Q8R3P9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slf1Q8R3P9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slf1Q8R3P9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.52■□□□□ 0.56
Slf1Q8R3P9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slf1Q8R3P9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slf1Q8R3P9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slf1Q8R3P9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Slf1Q8R3P9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slf1Q8R3P9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slf1Q8R3P9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.52■□□□□ 0.55
Slf1Q8R3P9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.55
Slf1Q8R3P9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Gm13241-201ENSMUST00000094493 780 ntBASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.51■□□□□ 0.55
Slf1Q8R3P9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slf1Q8R3P9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms