Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atf7Q8R0S1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atf7Q8R0S1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Atf7Q8R0S1 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.71■■□□□ 1.07
Atf7Q8R0S1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atf7Q8R0S1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atf7Q8R0S1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Atf7Q8R0S1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.71■■□□□ 1.07
Atf7Q8R0S1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.71■■□□□ 1.07
Atf7Q8R0S1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atf7Q8R0S1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atf7Q8R0S1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atf7Q8R0S1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Atf7Q8R0S1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.71■■□□□ 1.07
Atf7Q8R0S1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Atf7Q8R0S1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Atf7Q8R0S1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atf7Q8R0S1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atf7Q8R0S1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atf7Q8R0S1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Atf7Q8R0S1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Atf7Q8R0S1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Atf7Q8R0S1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atf7Q8R0S1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.7■■□□□ 1.06
Atf7Q8R0S1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atf7Q8R0S1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atf7Q8R0S1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atf7Q8R0S1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Atf7Q8R0S1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atf7Q8R0S1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.69■■□□□ 1.06
Atf7Q8R0S1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Atf7Q8R0S1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.69■■□□□ 1.06
Atf7Q8R0S1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.69■■□□□ 1.06
Atf7Q8R0S1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atf7Q8R0S1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atf7Q8R0S1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Atf7Q8R0S1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atf7Q8R0S1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Atf7Q8R0S1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atf7Q8R0S1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Atf7Q8R0S1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atf7Q8R0S1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atf7Q8R0S1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atf7Q8R0S1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atf7Q8R0S1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.68■■□□□ 1.06
Atf7Q8R0S1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Atf7Q8R0S1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Atf7Q8R0S1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Atf7Q8R0S1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atf7Q8R0S1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atf7Q8R0S1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atf7Q8R0S1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atf7Q8R0S1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atf7Q8R0S1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Atf7Q8R0S1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Atf7Q8R0S1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Atf7Q8R0S1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Atf7Q8R0S1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Atf7Q8R0S1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Atf7Q8R0S1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Atf7Q8R0S1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Atf7Q8R0S1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Atf7Q8R0S1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.64■■□□□ 1.05
Atf7Q8R0S1 Gm15039-201ENSMUST00000118914 875 ntBASIC21.64■■□□□ 1.05
Atf7Q8R0S1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.64■■□□□ 1.05
Atf7Q8R0S1 Gm22325-201ENSMUST00000158904 308 ntBASIC21.64■■□□□ 1.05
Atf7Q8R0S1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Atf7Q8R0S1 Gm6365-201ENSMUST00000054711 744 ntBASIC21.64■■□□□ 1.05
Atf7Q8R0S1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Atf7Q8R0S1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Atf7Q8R0S1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Atf7Q8R0S1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms