Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml1Q8K558 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml1Q8K558 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.13■□□□□ 0.49
Treml1Q8K558 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Treml1Q8K558 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml1Q8K558 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Treml1Q8K558 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml1Q8K558 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml1Q8K558 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml1Q8K558 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml1Q8K558 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Treml1Q8K558 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml1Q8K558 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml1Q8K558 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Treml1Q8K558 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.12■□□□□ 0.49
Treml1Q8K558 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Treml1Q8K558 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml1Q8K558 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml1Q8K558 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml1Q8K558 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml1Q8K558 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml1Q8K558 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.12■□□□□ 0.49
Treml1Q8K558 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Treml1Q8K558 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml1Q8K558 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml1Q8K558 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Treml1Q8K558 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Treml1Q8K558 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Treml1Q8K558 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Treml1Q8K558 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Treml1Q8K558 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.11■□□□□ 0.49
Treml1Q8K558 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.11■□□□□ 0.49
Treml1Q8K558 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Treml1Q8K558 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Treml1Q8K558 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Treml1Q8K558 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.11■□□□□ 0.49
Treml1Q8K558 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Treml1Q8K558 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Treml1Q8K558 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.11■□□□□ 0.49
Treml1Q8K558 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Treml1Q8K558 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.11■□□□□ 0.49
Treml1Q8K558 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Treml1Q8K558 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Treml1Q8K558 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Treml1Q8K558 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Treml1Q8K558 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.1■□□□□ 0.49
Treml1Q8K558 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Treml1Q8K558 Gm12933-201ENSMUST00000120203 872 ntBASIC18.1■□□□□ 0.49
Treml1Q8K558 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.1■□□□□ 0.49
Treml1Q8K558 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Treml1Q8K558 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Treml1Q8K558 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Treml1Q8K558 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Treml1Q8K558 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Treml1Q8K558 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml1Q8K558 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Treml1Q8K558 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Treml1Q8K558 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml1Q8K558 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml1Q8K558 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml1Q8K558 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml1Q8K558 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Treml1Q8K558 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml1Q8K558 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml1Q8K558 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Treml1Q8K558 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.09■□□□□ 0.49
Treml1Q8K558 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Treml1Q8K558 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Treml1Q8K558 Gm7290-201ENSMUST00000104990 617 ntBASIC18.08■□□□□ 0.48
Treml1Q8K558 Gm12918-201ENSMUST00000120234 636 ntBASIC18.08■□□□□ 0.48
Treml1Q8K558 Gm15710-201ENSMUST00000121821 636 ntBASIC18.08■□□□□ 0.48
Treml1Q8K558 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.08■□□□□ 0.48
Treml1Q8K558 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.08■□□□□ 0.48
Treml1Q8K558 Gm5075-201ENSMUST00000196916 622 ntBASIC18.08■□□□□ 0.48
Treml1Q8K558 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.08■□□□□ 0.48
Treml1Q8K558 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.08■□□□□ 0.48
Treml1Q8K558 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Treml1Q8K558 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Treml1Q8K558 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Treml1Q8K558 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.07■□□□□ 0.48
Treml1Q8K558 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Treml1Q8K558 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Treml1Q8K558 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Treml1Q8K558 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.07■□□□□ 0.48
Treml1Q8K558 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Treml1Q8K558 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Treml1Q8K558 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Treml1Q8K558 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.07■□□□□ 0.48
Treml1Q8K558 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Treml1Q8K558 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Treml1Q8K558 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Treml1Q8K558 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Treml1Q8K558 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Treml1Q8K558 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Treml1Q8K558 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Treml1Q8K558 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Treml1Q8K558 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Treml1Q8K558 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Treml1Q8K558 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Treml1Q8K558 Gm5408-201ENSMUST00000197998 747 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms