Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf4Q8K4J2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf4Q8K4J2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf4Q8K4J2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf4Q8K4J2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf4Q8K4J2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ebf4Q8K4J2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf4Q8K4J2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf4Q8K4J2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ebf4Q8K4J2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ebf4Q8K4J2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf4Q8K4J2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf4Q8K4J2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf4Q8K4J2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf4Q8K4J2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf4Q8K4J2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf4Q8K4J2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf4Q8K4J2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf4Q8K4J2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf4Q8K4J2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.73■□□□□ 0.27
Ebf4Q8K4J2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf4Q8K4J2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.73■□□□□ 0.27
Ebf4Q8K4J2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.73■□□□□ 0.27
Ebf4Q8K4J2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf4Q8K4J2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.73■□□□□ 0.27
Ebf4Q8K4J2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf4Q8K4J2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Ebf4Q8K4J2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf4Q8K4J2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.71■□□□□ 0.26
Ebf4Q8K4J2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms