Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cystm1Q8K353 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cystm1Q8K353 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Cystm1Q8K353 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cystm1Q8K353 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cystm1Q8K353 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Cystm1Q8K353 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC11.52□□□□□ -0.57
Cystm1Q8K353 Krt8-ps-201ENSMUST00000208495 945 ntBASIC11.52□□□□□ -0.57
Cystm1Q8K353 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cystm1Q8K353 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cystm1Q8K353 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cystm1Q8K353 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.51□□□□□ -0.57
Cystm1Q8K353 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.51□□□□□ -0.57
Cystm1Q8K353 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.5□□□□□ -0.57
Cystm1Q8K353 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.49□□□□□ -0.57
Cystm1Q8K353 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Gm45417-201ENSMUST00000209533 758 ntBASIC11.49□□□□□ -0.57
Cystm1Q8K353 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cystm1Q8K353 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms