Protein–RNA interactions for Protein: Q8K194

Snrnp27, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp27Q8K194 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Snrnp27Q8K194 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snrnp27Q8K194 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Snrnp27Q8K194 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snrnp27Q8K194 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snrnp27Q8K194 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snrnp27Q8K194 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Snrnp27Q8K194 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snrnp27Q8K194 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snrnp27Q8K194 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snrnp27Q8K194 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.16■□□□□ 0.5
Snrnp27Q8K194 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snrnp27Q8K194 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.16■□□□□ 0.5
Snrnp27Q8K194 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snrnp27Q8K194 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Snrnp27Q8K194 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms