Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.7■□□□□ 0.58
Rtn4rl1Q8K0S5 Gm11539-201ENSMUST00000119837 557 ntBASIC18.7■□□□□ 0.58
Rtn4rl1Q8K0S5 Gm13436-201ENSMUST00000120418 567 ntBASIC18.7■□□□□ 0.58
Rtn4rl1Q8K0S5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn4rl1Q8K0S5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.7■□□□□ 0.58
Rtn4rl1Q8K0S5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn4rl1Q8K0S5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn4rl1Q8K0S5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn4rl1Q8K0S5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtn4rl1Q8K0S5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rtn4rl1Q8K0S5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4rl1Q8K0S5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.68■□□□□ 0.58
Rtn4rl1Q8K0S5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.68■□□□□ 0.58
Rtn4rl1Q8K0S5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.68■□□□□ 0.58
Rtn4rl1Q8K0S5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4rl1Q8K0S5 Odf3b-204ENSMUST00000227834 930 ntBASIC18.68■□□□□ 0.58
Rtn4rl1Q8K0S5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4rl1Q8K0S5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.68■□□□□ 0.58
Rtn4rl1Q8K0S5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4rl1Q8K0S5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rtn4rl1Q8K0S5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.68■□□□□ 0.58
Rtn4rl1Q8K0S5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4rl1Q8K0S5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4rl1Q8K0S5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4rl1Q8K0S5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.67■□□□□ 0.58
Rtn4rl1Q8K0S5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4rl1Q8K0S5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4rl1Q8K0S5 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.67■□□□□ 0.58
Rtn4rl1Q8K0S5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4rl1Q8K0S5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4rl1Q8K0S5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtn4rl1Q8K0S5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4rl1Q8K0S5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4rl1Q8K0S5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4rl1Q8K0S5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rtn4rl1Q8K0S5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4rl1Q8K0S5 Gm3375-201ENSMUST00000203929 796 ntBASIC18.66■□□□□ 0.58
Rtn4rl1Q8K0S5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4rl1Q8K0S5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.66■□□□□ 0.58
Rtn4rl1Q8K0S5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.66■□□□□ 0.58
Rtn4rl1Q8K0S5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtn4rl1Q8K0S5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Rtn4rl1Q8K0S5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtn4rl1Q8K0S5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rtn4rl1Q8K0S5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.64■□□□□ 0.58
Rtn4rl1Q8K0S5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rtn4rl1Q8K0S5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Timm23-208ENSMUST00000226683 750 ntBASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtn4rl1Q8K0S5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtn4rl1Q8K0S5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms