Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd3Q8CIK8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd3Q8CIK8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd3Q8CIK8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd3Q8CIK8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.27■□□□□ 0.36
Rfwd3Q8CIK8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rfwd3Q8CIK8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd3Q8CIK8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd3Q8CIK8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd3Q8CIK8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd3Q8CIK8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.27■□□□□ 0.36
Rfwd3Q8CIK8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.27■□□□□ 0.36
Rfwd3Q8CIK8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd3Q8CIK8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd3Q8CIK8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfwd3Q8CIK8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfwd3Q8CIK8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rfwd3Q8CIK8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfwd3Q8CIK8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Rfwd3Q8CIK8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfwd3Q8CIK8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfwd3Q8CIK8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rfwd3Q8CIK8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfwd3Q8CIK8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Gm12933-201ENSMUST00000120203 872 ntBASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd3Q8CIK8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Gm7290-201ENSMUST00000104990 617 ntBASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Gm12918-201ENSMUST00000120234 636 ntBASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Gm15710-201ENSMUST00000121821 636 ntBASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Gm5075-201ENSMUST00000196916 622 ntBASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd3Q8CIK8 BC021767-201ENSMUST00000126387 1716 ntBASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 Gm6365-201ENSMUST00000054711 744 ntBASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfwd3Q8CIK8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd3Q8CIK8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd3Q8CIK8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rfwd3Q8CIK8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd3Q8CIK8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd3Q8CIK8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd3Q8CIK8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd3Q8CIK8 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.23■□□□□ 0.35
Rfwd3Q8CIK8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfwd3Q8CIK8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfwd3Q8CIK8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.22■□□□□ 0.35
Rfwd3Q8CIK8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rfwd3Q8CIK8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms