Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rp1l1Q8CGM2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Rp1l1Q8CGM2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Rp1l1Q8CGM2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rp1l1Q8CGM2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Rp1l1Q8CGM2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rp1l1Q8CGM2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rp1l1Q8CGM2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rp1l1Q8CGM2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rp1l1Q8CGM2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rp1l1Q8CGM2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rp1l1Q8CGM2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rp1l1Q8CGM2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rp1l1Q8CGM2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rp1l1Q8CGM2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.3■□□□□ 0.68
Rp1l1Q8CGM2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rp1l1Q8CGM2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rp1l1Q8CGM2 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.3■□□□□ 0.68
Rp1l1Q8CGM2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rp1l1Q8CGM2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rp1l1Q8CGM2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rp1l1Q8CGM2 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.3■□□□□ 0.68
Rp1l1Q8CGM2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rp1l1Q8CGM2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rp1l1Q8CGM2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rp1l1Q8CGM2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rp1l1Q8CGM2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rp1l1Q8CGM2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rp1l1Q8CGM2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rp1l1Q8CGM2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rp1l1Q8CGM2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.29■□□□□ 0.68
Rp1l1Q8CGM2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rp1l1Q8CGM2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rp1l1Q8CGM2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rp1l1Q8CGM2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rp1l1Q8CGM2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rp1l1Q8CGM2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rp1l1Q8CGM2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.28■□□□□ 0.68
Rp1l1Q8CGM2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rp1l1Q8CGM2 Gm7284-201ENSMUST00000131667 944 ntBASIC19.27■□□□□ 0.68
Rp1l1Q8CGM2 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.27■□□□□ 0.68
Rp1l1Q8CGM2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rp1l1Q8CGM2 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.27■□□□□ 0.68
Rp1l1Q8CGM2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rp1l1Q8CGM2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rp1l1Q8CGM2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rp1l1Q8CGM2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rp1l1Q8CGM2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rp1l1Q8CGM2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rp1l1Q8CGM2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rp1l1Q8CGM2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rp1l1Q8CGM2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rp1l1Q8CGM2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rp1l1Q8CGM2 Mir2861-201ENSMUST00000175539 82 ntBASIC19.26■□□□□ 0.67
Rp1l1Q8CGM2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Rp1l1Q8CGM2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rp1l1Q8CGM2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rp1l1Q8CGM2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rp1l1Q8CGM2 Gm18101-201ENSMUST00000215769 548 ntBASIC19.25■□□□□ 0.67
Rp1l1Q8CGM2 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.25■□□□□ 0.67
Rp1l1Q8CGM2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rp1l1Q8CGM2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rp1l1Q8CGM2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rp1l1Q8CGM2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rp1l1Q8CGM2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Rp1l1Q8CGM2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rp1l1Q8CGM2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rp1l1Q8CGM2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.24■□□□□ 0.67
Rp1l1Q8CGM2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rp1l1Q8CGM2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rp1l1Q8CGM2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rp1l1Q8CGM2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rp1l1Q8CGM2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rp1l1Q8CGM2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rp1l1Q8CGM2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.24■□□□□ 0.67
Rp1l1Q8CGM2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms