Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc28aQ8CEI3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc28aQ8CEI3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc28aQ8CEI3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc28aQ8CEI3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc28aQ8CEI3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc28aQ8CEI3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc28aQ8CEI3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc28aQ8CEI3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc28aQ8CEI3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc28aQ8CEI3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc28aQ8CEI3 Gm8493-201ENSMUST00000196881 489 ntBASIC19.39■□□□□ 0.69
Ccdc28aQ8CEI3 Gm43173-201ENSMUST00000202246 593 ntBASIC19.39■□□□□ 0.69
Ccdc28aQ8CEI3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Ccdc28aQ8CEI3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc28aQ8CEI3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ccdc28aQ8CEI3 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.38■□□□□ 0.69
Ccdc28aQ8CEI3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
Ccdc28aQ8CEI3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc28aQ8CEI3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc28aQ8CEI3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc28aQ8CEI3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc28aQ8CEI3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc28aQ8CEI3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc28aQ8CEI3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc28aQ8CEI3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc28aQ8CEI3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Ccdc28aQ8CEI3 Gm13241-201ENSMUST00000094493 780 ntBASIC19.38■□□□□ 0.69
Ccdc28aQ8CEI3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc28aQ8CEI3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Ccdc28aQ8CEI3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc28aQ8CEI3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc28aQ8CEI3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc28aQ8CEI3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc28aQ8CEI3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc28aQ8CEI3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc28aQ8CEI3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc28aQ8CEI3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc28aQ8CEI3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc28aQ8CEI3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc28aQ8CEI3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc28aQ8CEI3 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.37■□□□□ 0.69
Ccdc28aQ8CEI3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc28aQ8CEI3 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.36■□□□□ 0.69
Ccdc28aQ8CEI3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc28aQ8CEI3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc28aQ8CEI3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccdc28aQ8CEI3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc28aQ8CEI3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc28aQ8CEI3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc28aQ8CEI3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc28aQ8CEI3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc28aQ8CEI3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc28aQ8CEI3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc28aQ8CEI3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc28aQ8CEI3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc28aQ8CEI3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc28aQ8CEI3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Ccdc28aQ8CEI3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc28aQ8CEI3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.35■□□□□ 0.69
Ccdc28aQ8CEI3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms