Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb7Q8CDY9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhb7Q8CDY9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Gm13234-201ENSMUST00000120010 747 ntBASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhb7Q8CDY9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhb7Q8CDY9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb7Q8CDY9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb7Q8CDY9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb7Q8CDY9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdhb7Q8CDY9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb7Q8CDY9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb7Q8CDY9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Pcdhb7Q8CDY9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhb7Q8CDY9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb7Q8CDY9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb7Q8CDY9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb7Q8CDY9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pcdhb7Q8CDY9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb7Q8CDY9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb7Q8CDY9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pcdhb7Q8CDY9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhb7Q8CDY9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb7Q8CDY9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb7Q8CDY9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhb7Q8CDY9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhb7Q8CDY9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhb7Q8CDY9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Gm15039-201ENSMUST00000118914 875 ntBASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb7Q8CDY9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms