Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Pabpn1Q8CCS6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
Pabpn1Q8CCS6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Pabpn1Q8CCS6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
Pabpn1Q8CCS6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
Pabpn1Q8CCS6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC28.83■■■□□ 2.21
Pabpn1Q8CCS6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Pabpn1Q8CCS6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Pabpn1Q8CCS6 Gm18206-201ENSMUST00000207027 926 ntBASIC28.83■■■□□ 2.21
Pabpn1Q8CCS6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC28.83■■■□□ 2.21
Pabpn1Q8CCS6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC28.83■■■□□ 2.21
Pabpn1Q8CCS6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Pabpn1Q8CCS6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Pabpn1Q8CCS6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
Pabpn1Q8CCS6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Pabpn1Q8CCS6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Pabpn1Q8CCS6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pabpn1Q8CCS6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pabpn1Q8CCS6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pabpn1Q8CCS6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pabpn1Q8CCS6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pabpn1Q8CCS6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pabpn1Q8CCS6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Pabpn1Q8CCS6 Gm27459-201ENSMUST00000184860 107 ntBASIC28.81■■■□□ 2.2
Pabpn1Q8CCS6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pabpn1Q8CCS6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC28.8■■■□□ 2.2
Pabpn1Q8CCS6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC28.8■■■□□ 2.2
Pabpn1Q8CCS6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Pabpn1Q8CCS6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC28.8■■■□□ 2.2
Pabpn1Q8CCS6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pabpn1Q8CCS6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pabpn1Q8CCS6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC28.79■■■□□ 2.2
Pabpn1Q8CCS6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Pabpn1Q8CCS6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
Pabpn1Q8CCS6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pabpn1Q8CCS6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC28.79■■■□□ 2.2
Pabpn1Q8CCS6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pabpn1Q8CCS6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pabpn1Q8CCS6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pabpn1Q8CCS6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC28.77■■■□□ 2.2
Pabpn1Q8CCS6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC28.77■■■□□ 2.2
Pabpn1Q8CCS6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC28.77■■■□□ 2.2
Pabpn1Q8CCS6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC28.77■■■□□ 2.2
Pabpn1Q8CCS6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pabpn1Q8CCS6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Pabpn1Q8CCS6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pabpn1Q8CCS6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pabpn1Q8CCS6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pabpn1Q8CCS6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.2
Pabpn1Q8CCS6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC28.76■■■□□ 2.19
Pabpn1Q8CCS6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Pabpn1Q8CCS6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC28.76■■■□□ 2.19
Pabpn1Q8CCS6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Pabpn1Q8CCS6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC28.76■■■□□ 2.19
Pabpn1Q8CCS6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC28.76■■■□□ 2.19
Pabpn1Q8CCS6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Pabpn1Q8CCS6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Pabpn1Q8CCS6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
Pabpn1Q8CCS6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Pabpn1Q8CCS6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pabpn1Q8CCS6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pabpn1Q8CCS6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pabpn1Q8CCS6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pabpn1Q8CCS6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pabpn1Q8CCS6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pabpn1Q8CCS6 Gm11355-201ENSMUST00000121120 306 ntBASIC28.74■■■□□ 2.19
Pabpn1Q8CCS6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pabpn1Q8CCS6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Pabpn1Q8CCS6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
Pabpn1Q8CCS6 Gm7370-201ENSMUST00000219471 767 ntBASIC28.74■■■□□ 2.19
Pabpn1Q8CCS6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pabpn1Q8CCS6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pabpn1Q8CCS6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC28.74■■■□□ 2.19
Pabpn1Q8CCS6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Pabpn1Q8CCS6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pabpn1Q8CCS6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pabpn1Q8CCS6 Gm20100-201ENSMUST00000209418 2272 ntBASIC28.73■■■□□ 2.19
Pabpn1Q8CCS6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pabpn1Q8CCS6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Pabpn1Q8CCS6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC28.73■■■□□ 2.19
Pabpn1Q8CCS6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pabpn1Q8CCS6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pabpn1Q8CCS6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pabpn1Q8CCS6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Pabpn1Q8CCS6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Pabpn1Q8CCS6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pabpn1Q8CCS6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pabpn1Q8CCS6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pabpn1Q8CCS6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pabpn1Q8CCS6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pabpn1Q8CCS6 Gm8309-201ENSMUST00000206627 1448 ntBASIC28.72■■■□□ 2.19
Pabpn1Q8CCS6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC28.72■■■□□ 2.19
Pabpn1Q8CCS6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Pabpn1Q8CCS6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pabpn1Q8CCS6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
Pabpn1Q8CCS6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pabpn1Q8CCS6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Pabpn1Q8CCS6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC28.71■■■□□ 2.19
Pabpn1Q8CCS6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pabpn1Q8CCS6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms