Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf31Q8CCF0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf31Q8CCF0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf31Q8CCF0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf31Q8CCF0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf31Q8CCF0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.1■□□□□ 0.81
Prpf31Q8CCF0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.1■□□□□ 0.81
Prpf31Q8CCF0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf31Q8CCF0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf31Q8CCF0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf31Q8CCF0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf31Q8CCF0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf31Q8CCF0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.1■□□□□ 0.81
Prpf31Q8CCF0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf31Q8CCF0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.09■□□□□ 0.81
Prpf31Q8CCF0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Prpf31Q8CCF0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf31Q8CCF0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf31Q8CCF0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf31Q8CCF0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf31Q8CCF0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Prpf31Q8CCF0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Prpf31Q8CCF0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf31Q8CCF0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf31Q8CCF0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Prpf31Q8CCF0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf31Q8CCF0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 Gm2399-201ENSMUST00000104944 225 ntBASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 Gm22325-201ENSMUST00000158904 308 ntBASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Prpf31Q8CCF0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 Gm11249-201ENSMUST00000117071 859 ntBASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 BC021767-201ENSMUST00000126387 1716 ntBASIC20.05■□□□□ 0.8
Prpf31Q8CCF0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms