Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Uba3Q8C878 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Uba3Q8C878 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.41■□□□□ 0.7
Uba3Q8C878 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Uba3Q8C878 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Uba3Q8C878 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Uba3Q8C878 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Uba3Q8C878 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.4■□□□□ 0.7
Uba3Q8C878 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Uba3Q8C878 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Uba3Q8C878 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.4■□□□□ 0.7
Uba3Q8C878 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Uba3Q8C878 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Uba3Q8C878 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Uba3Q8C878 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Uba3Q8C878 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Uba3Q8C878 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Uba3Q8C878 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Uba3Q8C878 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Uba3Q8C878 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Uba3Q8C878 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Uba3Q8C878 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Uba3Q8C878 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Uba3Q8C878 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Uba3Q8C878 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.38■□□□□ 0.69
Uba3Q8C878 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Uba3Q8C878 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.38■□□□□ 0.69
Uba3Q8C878 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Uba3Q8C878 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Uba3Q8C878 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Uba3Q8C878 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uba3Q8C878 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Uba3Q8C878 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uba3Q8C878 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uba3Q8C878 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.37■□□□□ 0.69
Uba3Q8C878 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uba3Q8C878 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uba3Q8C878 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uba3Q8C878 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uba3Q8C878 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uba3Q8C878 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uba3Q8C878 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uba3Q8C878 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.37■□□□□ 0.69
Uba3Q8C878 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Uba3Q8C878 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uba3Q8C878 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uba3Q8C878 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uba3Q8C878 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uba3Q8C878 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.36■□□□□ 0.69
Uba3Q8C878 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uba3Q8C878 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uba3Q8C878 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uba3Q8C878 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uba3Q8C878 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uba3Q8C878 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uba3Q8C878 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uba3Q8C878 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Uba3Q8C878 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Uba3Q8C878 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uba3Q8C878 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Uba3Q8C878 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Uba3Q8C878 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Uba3Q8C878 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Uba3Q8C878 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Uba3Q8C878 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Uba3Q8C878 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.35■□□□□ 0.69
Uba3Q8C878 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.35■□□□□ 0.69
Uba3Q8C878 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Uba3Q8C878 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Uba3Q8C878 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Uba3Q8C878 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.35■□□□□ 0.69
Uba3Q8C878 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Uba3Q8C878 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Uba3Q8C878 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Uba3Q8C878 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Uba3Q8C878 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Uba3Q8C878 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Uba3Q8C878 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Uba3Q8C878 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.34■□□□□ 0.69
Uba3Q8C878 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Uba3Q8C878 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Uba3Q8C878 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Uba3Q8C878 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Uba3Q8C878 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.33■□□□□ 0.68
Uba3Q8C878 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Uba3Q8C878 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Uba3Q8C878 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Uba3Q8C878 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Uba3Q8C878 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Uba3Q8C878 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Uba3Q8C878 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uba3Q8C878 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.32■□□□□ 0.68
Uba3Q8C878 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uba3Q8C878 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Uba3Q8C878 Gm5408-201ENSMUST00000197998 747 ntBASIC19.32■□□□□ 0.68
Uba3Q8C878 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uba3Q8C878 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uba3Q8C878 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.32■□□□□ 0.68
Uba3Q8C878 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uba3Q8C878 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms