Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim9Q8C7M3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.32■□□□□ 0.84
Trim9Q8C7M3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.32■□□□□ 0.84
Trim9Q8C7M3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim9Q8C7M3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.32■□□□□ 0.84
Trim9Q8C7M3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trim9Q8C7M3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.32■□□□□ 0.84
Trim9Q8C7M3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.32■□□□□ 0.84
Trim9Q8C7M3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim9Q8C7M3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim9Q8C7M3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim9Q8C7M3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim9Q8C7M3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim9Q8C7M3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim9Q8C7M3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim9Q8C7M3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim9Q8C7M3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim9Q8C7M3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim9Q8C7M3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim9Q8C7M3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim9Q8C7M3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim9Q8C7M3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim9Q8C7M3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim9Q8C7M3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim9Q8C7M3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim9Q8C7M3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim9Q8C7M3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim9Q8C7M3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim9Q8C7M3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim9Q8C7M3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim9Q8C7M3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim9Q8C7M3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim9Q8C7M3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim9Q8C7M3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Grk6-206ENSMUST00000224995 2971 ntBASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim9Q8C7M3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Gm6365-201ENSMUST00000054711 744 ntBASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim9Q8C7M3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim9Q8C7M3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim9Q8C7M3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trim9Q8C7M3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim9Q8C7M3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim9Q8C7M3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim9Q8C7M3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim9Q8C7M3 Gm27405-201ENSMUST00000184201 112 ntBASIC20.26■□□□□ 0.83
Trim9Q8C7M3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim9Q8C7M3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Trim9Q8C7M3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim9Q8C7M3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim9Q8C7M3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim9Q8C7M3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim9Q8C7M3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.26■□□□□ 0.83
Trim9Q8C7M3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Gm22325-201ENSMUST00000158904 308 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms