Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a6Q8C6K9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a6Q8C6K9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Col6a6Q8C6K9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.61■□□□□ 0.25
Col6a6Q8C6K9 Gm42545-201ENSMUST00000202755 922 ntBASIC16.61■□□□□ 0.25
Col6a6Q8C6K9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a6Q8C6K9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a6Q8C6K9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a6Q8C6K9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a6Q8C6K9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a6Q8C6K9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col6a6Q8C6K9 Ank2-226ENSMUST00000189368 339 ntBASIC16.59■□□□□ 0.25
Col6a6Q8C6K9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.59■□□□□ 0.25
Col6a6Q8C6K9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col6a6Q8C6K9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col6a6Q8C6K9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col6a6Q8C6K9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col6a6Q8C6K9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col6a6Q8C6K9 Gm15375-201ENSMUST00000119510 849 ntBASIC16.58■□□□□ 0.25
Col6a6Q8C6K9 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.58■□□□□ 0.25
Col6a6Q8C6K9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col6a6Q8C6K9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Col6a6Q8C6K9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a6Q8C6K9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a6Q8C6K9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a6Q8C6K9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.58■□□□□ 0.24
Col6a6Q8C6K9 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.58■□□□□ 0.24
Col6a6Q8C6K9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a6Q8C6K9 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.58■□□□□ 0.24
Col6a6Q8C6K9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a6Q8C6K9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a6Q8C6K9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a6Q8C6K9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Col6a6Q8C6K9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a6Q8C6K9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col6a6Q8C6K9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Col6a6Q8C6K9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col6a6Q8C6K9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a6Q8C6K9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a6Q8C6K9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col6a6Q8C6K9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a6Q8C6K9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a6Q8C6K9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a6Q8C6K9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Col6a6Q8C6K9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a6Q8C6K9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 Gm3375-201ENSMUST00000203929 796 ntBASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a6Q8C6K9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms