Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Gm26833-201ENSMUST00000180899 440 ntBASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps9d1Q8C190 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vps9d1Q8C190 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Vps9d1Q8C190 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vps9d1Q8C190 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps9d1Q8C190 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Smad6-203ENSMUST00000179458 273 ntBASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps9d1Q8C190 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Vps9d1Q8C190 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps9d1Q8C190 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps9d1Q8C190 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.18■□□□□ 0.34
Vps9d1Q8C190 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Vps9d1Q8C190 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.18■□□□□ 0.34
Vps9d1Q8C190 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps9d1Q8C190 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps9d1Q8C190 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps9d1Q8C190 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Vps9d1Q8C190 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Vps9d1Q8C190 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps9d1Q8C190 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps9d1Q8C190 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.17■□□□□ 0.34
Vps9d1Q8C190 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps9d1Q8C190 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Vps9d1Q8C190 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.17■□□□□ 0.34
Vps9d1Q8C190 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.17■□□□□ 0.34
Vps9d1Q8C190 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps9d1Q8C190 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Vps9d1Q8C190 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps9d1Q8C190 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms