Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf3Q8C120 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf3Q8C120 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf3Q8C120 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf3Q8C120 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Sh3rf3Q8C120 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf3Q8C120 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.16■□□□□ 0.66
Sh3rf3Q8C120 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Sh3rf3Q8C120 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.16■□□□□ 0.66
Sh3rf3Q8C120 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf3Q8C120 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf3Q8C120 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf3Q8C120 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf3Q8C120 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Sh3rf3Q8C120 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sh3rf3Q8C120 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3rf3Q8C120 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3rf3Q8C120 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3rf3Q8C120 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3rf3Q8C120 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sh3rf3Q8C120 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sh3rf3Q8C120 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.14■□□□□ 0.65
Sh3rf3Q8C120 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3rf3Q8C120 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3rf3Q8C120 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3rf3Q8C120 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3rf3Q8C120 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Sh3rf3Q8C120 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3rf3Q8C120 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.14■□□□□ 0.65
Sh3rf3Q8C120 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Sh3rf3Q8C120 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Sh3rf3Q8C120 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.14■□□□□ 0.65
Sh3rf3Q8C120 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf3Q8C120 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sh3rf3Q8C120 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf3Q8C120 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sh3rf3Q8C120 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf3Q8C120 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sh3rf3Q8C120 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.13■□□□□ 0.65
Sh3rf3Q8C120 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf3Q8C120 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.13■□□□□ 0.65
Sh3rf3Q8C120 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf3Q8C120 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf3Q8C120 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3rf3Q8C120 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf3Q8C120 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.11■□□□□ 0.65
Sh3rf3Q8C120 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf3Q8C120 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf3Q8C120 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.11■□□□□ 0.65
Sh3rf3Q8C120 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Sh3rf3Q8C120 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf3Q8C120 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf3Q8C120 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf3Q8C120 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3rf3Q8C120 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Sh3rf3Q8C120 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf3Q8C120 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf3Q8C120 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf3Q8C120 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf3Q8C120 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf3Q8C120 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf3Q8C120 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf3Q8C120 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf3Q8C120 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.09■□□□□ 0.65
Sh3rf3Q8C120 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf3Q8C120 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf3Q8C120 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3rf3Q8C120 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3rf3Q8C120 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms