Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm11Q8BUV6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm11Q8BUV6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm11Q8BUV6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm11Q8BUV6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm11Q8BUV6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm11Q8BUV6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Lsm11Q8BUV6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm11Q8BUV6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Lsm11Q8BUV6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Lsm11Q8BUV6 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm11Q8BUV6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm11Q8BUV6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm11Q8BUV6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm11Q8BUV6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm11Q8BUV6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm11Q8BUV6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Lsm11Q8BUV6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm11Q8BUV6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Lsm11Q8BUV6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm11Q8BUV6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lsm11Q8BUV6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Lsm11Q8BUV6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Lsm11Q8BUV6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Lsm11Q8BUV6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lsm11Q8BUV6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms