Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp43Q8BUM9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp43Q8BUM9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp43Q8BUM9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp43Q8BUM9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.62■□□□□ 0.57
Usp43Q8BUM9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp43Q8BUM9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp43Q8BUM9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp43Q8BUM9 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.62■□□□□ 0.57
Usp43Q8BUM9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp43Q8BUM9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp43Q8BUM9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp43Q8BUM9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp43Q8BUM9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Usp43Q8BUM9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Usp43Q8BUM9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.61■□□□□ 0.57
Usp43Q8BUM9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.61■□□□□ 0.57
Usp43Q8BUM9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Usp43Q8BUM9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp43Q8BUM9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp43Q8BUM9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Usp43Q8BUM9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.61■□□□□ 0.57
Usp43Q8BUM9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp43Q8BUM9 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Gm7290-201ENSMUST00000104990 617 ntBASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Gm12918-201ENSMUST00000120234 636 ntBASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Gm15710-201ENSMUST00000121821 636 ntBASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Gm22325-201ENSMUST00000158904 308 ntBASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Gm5075-201ENSMUST00000196916 622 ntBASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Gm7291-201ENSMUST00000199147 382 ntBASIC18.59■□□□□ 0.57
Usp43Q8BUM9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.59■□□□□ 0.57
Usp43Q8BUM9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp43Q8BUM9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp43Q8BUM9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp43Q8BUM9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Usp43Q8BUM9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Usp43Q8BUM9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp43Q8BUM9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp43Q8BUM9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp43Q8BUM9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp43Q8BUM9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp43Q8BUM9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp43Q8BUM9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp43Q8BUM9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp43Q8BUM9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp43Q8BUM9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.57■□□□□ 0.56
Usp43Q8BUM9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp43Q8BUM9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp43Q8BUM9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp43Q8BUM9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms