Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpne3Q8BT60 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Gm9988-201ENSMUST00000069786 435 ntBASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpne3Q8BT60 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.75■□□□□ 0.43
Cpne3Q8BT60 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.74■□□□□ 0.43
Cpne3Q8BT60 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne3Q8BT60 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne3Q8BT60 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne3Q8BT60 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne3Q8BT60 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne3Q8BT60 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.74■□□□□ 0.43
Cpne3Q8BT60 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne3Q8BT60 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne3Q8BT60 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne3Q8BT60 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.74■□□□□ 0.43
Cpne3Q8BT60 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cpne3Q8BT60 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpne3Q8BT60 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne3Q8BT60 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cpne3Q8BT60 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne3Q8BT60 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Cpne3Q8BT60 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne3Q8BT60 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.73■□□□□ 0.43
Cpne3Q8BT60 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne3Q8BT60 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne3Q8BT60 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cpne3Q8BT60 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.73■□□□□ 0.43
Cpne3Q8BT60 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.73■□□□□ 0.43
Cpne3Q8BT60 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Cpne3Q8BT60 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne3Q8BT60 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne3Q8BT60 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpne3Q8BT60 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpne3Q8BT60 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpne3Q8BT60 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cpne3Q8BT60 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms