Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ckap4Q8BMK4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ckap4Q8BMK4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ckap4Q8BMK4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ckap4Q8BMK4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ckap4Q8BMK4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ckap4Q8BMK4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap4Q8BMK4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms