Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC24.42■■□□□ 1.5
Col16a1Q8BLX7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col16a1Q8BLX7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC24.41■■□□□ 1.5
Col16a1Q8BLX7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col16a1Q8BLX7 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.41■■□□□ 1.5
Col16a1Q8BLX7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC24.41■■□□□ 1.5
Col16a1Q8BLX7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Col16a1Q8BLX7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Col16a1Q8BLX7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Col16a1Q8BLX7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC24.4■■□□□ 1.5
Col16a1Q8BLX7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Col16a1Q8BLX7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Col16a1Q8BLX7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col16a1Q8BLX7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC24.4■■□□□ 1.5
Col16a1Q8BLX7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col16a1Q8BLX7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col16a1Q8BLX7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col16a1Q8BLX7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col16a1Q8BLX7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col16a1Q8BLX7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col16a1Q8BLX7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col16a1Q8BLX7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col16a1Q8BLX7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Col16a1Q8BLX7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Col16a1Q8BLX7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC24.39■■□□□ 1.5
Col16a1Q8BLX7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Col16a1Q8BLX7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Col16a1Q8BLX7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
Col16a1Q8BLX7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Col16a1Q8BLX7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Col16a1Q8BLX7 Gm12382-201ENSMUST00000122005 922 ntBASIC24.38■■□□□ 1.49
Col16a1Q8BLX7 Gm27741-201ENSMUST00000185060 237 ntBASIC24.38■■□□□ 1.49
Col16a1Q8BLX7 Gm18032-201ENSMUST00000222541 538 ntBASIC24.38■■□□□ 1.49
Col16a1Q8BLX7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col16a1Q8BLX7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Col16a1Q8BLX7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col16a1Q8BLX7 Gm44544-201ENSMUST00000207052 1844 ntBASIC24.38■■□□□ 1.49
Col16a1Q8BLX7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC24.37■■□□□ 1.49
Col16a1Q8BLX7 Gm10517-202ENSMUST00000192970 758 ntBASIC24.37■■□□□ 1.49
Col16a1Q8BLX7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col16a1Q8BLX7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col16a1Q8BLX7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col16a1Q8BLX7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC24.37■■□□□ 1.49
Col16a1Q8BLX7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col16a1Q8BLX7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Col16a1Q8BLX7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col16a1Q8BLX7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col16a1Q8BLX7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col16a1Q8BLX7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Col16a1Q8BLX7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Col16a1Q8BLX7 Gm6728-201ENSMUST00000178117 1065 ntBASIC24.36■■□□□ 1.49
Col16a1Q8BLX7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col16a1Q8BLX7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col16a1Q8BLX7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col16a1Q8BLX7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC24.35■■□□□ 1.49
Col16a1Q8BLX7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col16a1Q8BLX7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC24.35■■□□□ 1.49
Col16a1Q8BLX7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col16a1Q8BLX7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC24.35■■□□□ 1.49
Col16a1Q8BLX7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Col16a1Q8BLX7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col16a1Q8BLX7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col16a1Q8BLX7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col16a1Q8BLX7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col16a1Q8BLX7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col16a1Q8BLX7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
Col16a1Q8BLX7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Col16a1Q8BLX7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col16a1Q8BLX7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Col16a1Q8BLX7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col16a1Q8BLX7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col16a1Q8BLX7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC24.34■■□□□ 1.49
Col16a1Q8BLX7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col16a1Q8BLX7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col16a1Q8BLX7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Col16a1Q8BLX7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Col16a1Q8BLX7 Gm23634-201ENSMUST00000175071 91 ntBASIC24.33■■□□□ 1.49
Col16a1Q8BLX7 Mir2861-201ENSMUST00000175539 82 ntBASIC24.33■■□□□ 1.49
Col16a1Q8BLX7 Mir6349-201ENSMUST00000184059 97 ntBASIC24.33■■□□□ 1.49
Col16a1Q8BLX7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Col16a1Q8BLX7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Col16a1Q8BLX7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Col16a1Q8BLX7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Col16a1Q8BLX7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Col16a1Q8BLX7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC24.33■■□□□ 1.48
Col16a1Q8BLX7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC24.33■■□□□ 1.48
Col16a1Q8BLX7 Gm6345-202ENSMUST00000180900 204 ntBASIC24.33■■□□□ 1.48
Col16a1Q8BLX7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Col16a1Q8BLX7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Col16a1Q8BLX7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
Col16a1Q8BLX7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC24.33■■□□□ 1.48
Col16a1Q8BLX7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Col16a1Q8BLX7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Col16a1Q8BLX7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC24.32■■□□□ 1.48
Col16a1Q8BLX7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Col16a1Q8BLX7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Col16a1Q8BLX7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC24.32■■□□□ 1.48
Col16a1Q8BLX7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col16a1Q8BLX7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col16a1Q8BLX7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms