Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp1Q8BJ37 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Tdp1Q8BJ37 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tdp1Q8BJ37 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tdp1Q8BJ37 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tdp1Q8BJ37 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.36■□□□□ 0.85
Tdp1Q8BJ37 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tdp1Q8BJ37 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tdp1Q8BJ37 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tdp1Q8BJ37 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tdp1Q8BJ37 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tdp1Q8BJ37 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
Tdp1Q8BJ37 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tdp1Q8BJ37 Gm11643-201ENSMUST00000119578 864 ntBASIC20.35■□□□□ 0.85
Tdp1Q8BJ37 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tdp1Q8BJ37 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Tdp1Q8BJ37 Gm38285-201ENSMUST00000192928 922 ntBASIC20.35■□□□□ 0.85
Tdp1Q8BJ37 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tdp1Q8BJ37 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tdp1Q8BJ37 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Tdp1Q8BJ37 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tdp1Q8BJ37 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tdp1Q8BJ37 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Tdp1Q8BJ37 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.35■□□□□ 0.85
Tdp1Q8BJ37 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tdp1Q8BJ37 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tdp1Q8BJ37 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tdp1Q8BJ37 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Tdp1Q8BJ37 Gm42545-201ENSMUST00000202755 922 ntBASIC20.34■□□□□ 0.85
Tdp1Q8BJ37 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.34■□□□□ 0.85
Tdp1Q8BJ37 Gm18025-201ENSMUST00000221733 862 ntBASIC20.34■□□□□ 0.85
Tdp1Q8BJ37 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tdp1Q8BJ37 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.34■□□□□ 0.85
Tdp1Q8BJ37 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Gm15375-201ENSMUST00000119510 849 ntBASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp1Q8BJ37 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Tdp1Q8BJ37 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Tdp1Q8BJ37 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tdp1Q8BJ37 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tdp1Q8BJ37 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp1Q8BJ37 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp1Q8BJ37 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Tdp1Q8BJ37 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.32■□□□□ 0.84
Tdp1Q8BJ37 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp1Q8BJ37 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp1Q8BJ37 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp1Q8BJ37 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp1Q8BJ37 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp1Q8BJ37 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp1Q8BJ37 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp1Q8BJ37 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.31■□□□□ 0.84
Tdp1Q8BJ37 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp1Q8BJ37 Gm43799-201ENSMUST00000201845 579 ntBASIC20.31■□□□□ 0.84
Tdp1Q8BJ37 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp1Q8BJ37 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp1Q8BJ37 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp1Q8BJ37 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp1Q8BJ37 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp1Q8BJ37 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp1Q8BJ37 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp1Q8BJ37 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp1Q8BJ37 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp1Q8BJ37 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp1Q8BJ37 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp1Q8BJ37 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp1Q8BJ37 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp1Q8BJ37 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tdp1Q8BJ37 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.29■□□□□ 0.84
Tdp1Q8BJ37 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tdp1Q8BJ37 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.29■□□□□ 0.84
Tdp1Q8BJ37 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.29■□□□□ 0.84
Tdp1Q8BJ37 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tdp1Q8BJ37 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.29■□□□□ 0.84
Tdp1Q8BJ37 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms