Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Gm13146-201ENSMUST00000118508 780 ntBASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc40Q8BI79 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc40Q8BI79 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc40Q8BI79 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.1■□□□□ 0.65
Ccdc40Q8BI79 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc40Q8BI79 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc40Q8BI79 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Ccdc40Q8BI79 Gm10493-201ENSMUST00000097270 612 ntBASIC19.1■□□□□ 0.65
Ccdc40Q8BI79 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc40Q8BI79 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc40Q8BI79 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc40Q8BI79 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc40Q8BI79 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc40Q8BI79 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc40Q8BI79 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ccdc40Q8BI79 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc40Q8BI79 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc40Q8BI79 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc40Q8BI79 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc40Q8BI79 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc40Q8BI79 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc40Q8BI79 Gm13234-201ENSMUST00000120010 747 ntBASIC19.08■□□□□ 0.64
Ccdc40Q8BI79 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Ccdc40Q8BI79 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.08■□□□□ 0.64
Ccdc40Q8BI79 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
Ccdc40Q8BI79 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc40Q8BI79 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc40Q8BI79 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc40Q8BI79 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ccdc40Q8BI79 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Ccdc40Q8BI79 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc40Q8BI79 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Fst-202ENSMUST00000223640 2612 ntBASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc40Q8BI79 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms