Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf38Q8BI21 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf38Q8BI21 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.7■□□□□ 0.42
Rnf38Q8BI21 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf38Q8BI21 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Rnf38Q8BI21 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rnf38Q8BI21 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.67■□□□□ 0.42
Rnf38Q8BI21 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf38Q8BI21 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf38Q8BI21 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf38Q8BI21 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf38Q8BI21 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf38Q8BI21 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.67■□□□□ 0.42
Rnf38Q8BI21 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.67■□□□□ 0.42
Rnf38Q8BI21 Gm43060-201ENSMUST00000200621 289 ntBASIC17.67■□□□□ 0.42
Rnf38Q8BI21 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf38Q8BI21 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf38Q8BI21 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms