Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.52■□□□□ 0.72
Trim6Q8BGE7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim6Q8BGE7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim6Q8BGE7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim6Q8BGE7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trim6Q8BGE7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim6Q8BGE7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim6Q8BGE7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim6Q8BGE7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Trim6Q8BGE7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim6Q8BGE7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.5■□□□□ 0.71
Trim6Q8BGE7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim6Q8BGE7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim6Q8BGE7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim6Q8BGE7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim6Q8BGE7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim6Q8BGE7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim6Q8BGE7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim6Q8BGE7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim6Q8BGE7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim6Q8BGE7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.49■□□□□ 0.71
Trim6Q8BGE7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.49■□□□□ 0.71
Trim6Q8BGE7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Trim6Q8BGE7 Gm11421-201ENSMUST00000122124 294 ntBASIC19.49■□□□□ 0.71
Trim6Q8BGE7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim6Q8BGE7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim6Q8BGE7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.49■□□□□ 0.71
Trim6Q8BGE7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim6Q8BGE7 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.49■□□□□ 0.71
Trim6Q8BGE7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Trim6Q8BGE7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Gm7860-201ENSMUST00000121190 879 ntBASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim6Q8BGE7 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim6Q8BGE7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Trim6Q8BGE7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim6Q8BGE7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim6Q8BGE7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim6Q8BGE7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim6Q8BGE7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim6Q8BGE7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim6Q8BGE7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim6Q8BGE7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim6Q8BGE7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim6Q8BGE7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim6Q8BGE7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim6Q8BGE7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms