Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.33■□□□□ 0.36
Atg4bQ8BGE6 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.33■□□□□ 0.36
Atg4bQ8BGE6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atg4bQ8BGE6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atg4bQ8BGE6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atg4bQ8BGE6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Atg4bQ8BGE6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4bQ8BGE6 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.31■□□□□ 0.36
Atg4bQ8BGE6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4bQ8BGE6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.31■□□□□ 0.36
Atg4bQ8BGE6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4bQ8BGE6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.31■□□□□ 0.36
Atg4bQ8BGE6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4bQ8BGE6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4bQ8BGE6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4bQ8BGE6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4bQ8BGE6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Atg4bQ8BGE6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atg4bQ8BGE6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atg4bQ8BGE6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Gm7290-201ENSMUST00000104990 617 ntBASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Gm12918-201ENSMUST00000120234 636 ntBASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Gm15710-201ENSMUST00000121821 636 ntBASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Gm5075-201ENSMUST00000196916 622 ntBASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Atg4bQ8BGE6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4bQ8BGE6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Atg4bQ8BGE6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4bQ8BGE6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Atg4bQ8BGE6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4bQ8BGE6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Atg4bQ8BGE6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4bQ8BGE6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.28■□□□□ 0.36
Atg4bQ8BGE6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Atg4bQ8BGE6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4bQ8BGE6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4bQ8BGE6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atg4bQ8BGE6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atg4bQ8BGE6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Atg4bQ8BGE6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Atg4bQ8BGE6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Atg4bQ8BGE6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atg4bQ8BGE6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atg4bQ8BGE6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atg4bQ8BGE6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Atg4bQ8BGE6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atg4bQ8BGE6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Atg4bQ8BGE6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atg4bQ8BGE6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atg4bQ8BGE6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atg4bQ8BGE6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atg4bQ8BGE6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atg4bQ8BGE6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms