Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim65Q8BFW4 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.7■□□□□ 0.74
Trim65Q8BFW4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim65Q8BFW4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim65Q8BFW4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim65Q8BFW4 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.69■□□□□ 0.74
Trim65Q8BFW4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim65Q8BFW4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim65Q8BFW4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim65Q8BFW4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.69■□□□□ 0.74
Trim65Q8BFW4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim65Q8BFW4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim65Q8BFW4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim65Q8BFW4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim65Q8BFW4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim65Q8BFW4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim65Q8BFW4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim65Q8BFW4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim65Q8BFW4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim65Q8BFW4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim65Q8BFW4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim65Q8BFW4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim65Q8BFW4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim65Q8BFW4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trim65Q8BFW4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim65Q8BFW4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim65Q8BFW4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim65Q8BFW4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.67■□□□□ 0.74
Trim65Q8BFW4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim65Q8BFW4 Gm27405-201ENSMUST00000184201 112 ntBASIC19.67■□□□□ 0.74
Trim65Q8BFW4 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.67■□□□□ 0.74
Trim65Q8BFW4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim65Q8BFW4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim65Q8BFW4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Trim65Q8BFW4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim65Q8BFW4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim65Q8BFW4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Gm6365-201ENSMUST00000054711 744 ntBASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim65Q8BFW4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim65Q8BFW4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Trim65Q8BFW4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.64■□□□□ 0.74
Trim65Q8BFW4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trim65Q8BFW4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.64■□□□□ 0.73
Trim65Q8BFW4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Trim65Q8BFW4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim65Q8BFW4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim65Q8BFW4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim65Q8BFW4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim65Q8BFW4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim65Q8BFW4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim65Q8BFW4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim65Q8BFW4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim65Q8BFW4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.63■□□□□ 0.73
Trim65Q8BFW4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim65Q8BFW4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim65Q8BFW4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim65Q8BFW4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim65Q8BFW4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trim65Q8BFW4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim65Q8BFW4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.63■□□□□ 0.73
Trim65Q8BFW4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms