Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Upk3bQ80YF6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Upk3bQ80YF6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Upk3bQ80YF6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Upk3bQ80YF6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.57■□□□□ 0.08
Upk3bQ80YF6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Upk3bQ80YF6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Upk3bQ80YF6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Upk3bQ80YF6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Upk3bQ80YF6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Upk3bQ80YF6 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.57■□□□□ 0.08
Upk3bQ80YF6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Upk3bQ80YF6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Upk3bQ80YF6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Upk3bQ80YF6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Upk3bQ80YF6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Upk3bQ80YF6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Upk3bQ80YF6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Upk3bQ80YF6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Upk3bQ80YF6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.56■□□□□ 0.08
Upk3bQ80YF6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Upk3bQ80YF6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.56■□□□□ 0.08
Upk3bQ80YF6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Upk3bQ80YF6 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.56■□□□□ 0.08
Upk3bQ80YF6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Upk3bQ80YF6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Upk3bQ80YF6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Upk3bQ80YF6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.56■□□□□ 0.08
Upk3bQ80YF6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Upk3bQ80YF6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Upk3bQ80YF6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 Smad6-203ENSMUST00000179458 273 ntBASIC15.55■□□□□ 0.08
Upk3bQ80YF6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.55■□□□□ 0.08
Upk3bQ80YF6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Upk3bQ80YF6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Upk3bQ80YF6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk3bQ80YF6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk3bQ80YF6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Upk3bQ80YF6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk3bQ80YF6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk3bQ80YF6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk3bQ80YF6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.53■□□□□ 0.08
Upk3bQ80YF6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk3bQ80YF6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk3bQ80YF6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk3bQ80YF6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk3bQ80YF6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Upk3bQ80YF6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Upk3bQ80YF6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Upk3bQ80YF6 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.52■□□□□ 0.08
Upk3bQ80YF6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Upk3bQ80YF6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Upk3bQ80YF6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Upk3bQ80YF6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk3bQ80YF6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Upk3bQ80YF6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Upk3bQ80YF6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk3bQ80YF6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Upk3bQ80YF6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Upk3bQ80YF6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Upk3bQ80YF6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Upk3bQ80YF6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk3bQ80YF6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Upk3bQ80YF6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Upk3bQ80YF6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk3bQ80YF6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Upk3bQ80YF6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Upk3bQ80YF6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk3bQ80YF6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk3bQ80YF6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Upk3bQ80YF6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms