Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prdm4Q80V63 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Prdm4Q80V63 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prdm4Q80V63 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prdm4Q80V63 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm4Q80V63 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm4Q80V63 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm4Q80V63 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm4Q80V63 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm4Q80V63 Gm12821-201ENSMUST00000120022 600 ntBASIC19.05■□□□□ 0.64
Prdm4Q80V63 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.05■□□□□ 0.64
Prdm4Q80V63 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm4Q80V63 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.05■□□□□ 0.64
Prdm4Q80V63 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm4Q80V63 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.05■□□□□ 0.64
Prdm4Q80V63 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm4Q80V63 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm4Q80V63 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm4Q80V63 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prdm4Q80V63 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Prdm4Q80V63 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prdm4Q80V63 Haglr-201ENSMUST00000100000 2085 ntBASIC19.04■□□□□ 0.64
Prdm4Q80V63 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Prdm4Q80V63 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm4Q80V63 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm4Q80V63 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.03■□□□□ 0.64
Prdm4Q80V63 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm4Q80V63 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm4Q80V63 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm4Q80V63 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.03■□□□□ 0.64
Prdm4Q80V63 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm4Q80V63 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.03■□□□□ 0.64
Prdm4Q80V63 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.03■□□□□ 0.64
Prdm4Q80V63 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prdm4Q80V63 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prdm4Q80V63 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prdm4Q80V63 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prdm4Q80V63 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prdm4Q80V63 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.02■□□□□ 0.64
Prdm4Q80V63 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.02■□□□□ 0.64
Prdm4Q80V63 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Prdm4Q80V63 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prdm4Q80V63 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prdm4Q80V63 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Prdm4Q80V63 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.02■□□□□ 0.64
Prdm4Q80V63 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prdm4Q80V63 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Prdm4Q80V63 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prdm4Q80V63 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Prdm4Q80V63 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Prdm4Q80V63 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.01■□□□□ 0.63
Prdm4Q80V63 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prdm4Q80V63 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prdm4Q80V63 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prdm4Q80V63 Gm43672-201ENSMUST00000199072 1731 ntBASIC19■□□□□ 0.63
Prdm4Q80V63 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19■□□□□ 0.63
Prdm4Q80V63 Gm27454-201ENSMUST00000185090 204 ntBASIC19■□□□□ 0.63
Prdm4Q80V63 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Prdm4Q80V63 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prdm4Q80V63 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Prdm4Q80V63 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prdm4Q80V63 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms