Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.43■□□□□ 0.54
Usp8Q80U87 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Usp8Q80U87 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Usp8Q80U87 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.43■□□□□ 0.54
Usp8Q80U87 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp8Q80U87 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp8Q80U87 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.43■□□□□ 0.54
Usp8Q80U87 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp8Q80U87 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.42■□□□□ 0.54
Usp8Q80U87 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp8Q80U87 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Usp8Q80U87 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp8Q80U87 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp8Q80U87 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp8Q80U87 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp8Q80U87 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp8Q80U87 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp8Q80U87 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp8Q80U87 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Usp8Q80U87 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp8Q80U87 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp8Q80U87 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp8Q80U87 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.41■□□□□ 0.54
Usp8Q80U87 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.41■□□□□ 0.54
Usp8Q80U87 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.41■□□□□ 0.54
Usp8Q80U87 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Usp8Q80U87 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Usp8Q80U87 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Usp8Q80U87 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.41■□□□□ 0.54
Usp8Q80U87 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.41■□□□□ 0.54
Usp8Q80U87 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.41■□□□□ 0.54
Usp8Q80U87 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Usp8Q80U87 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Usp8Q80U87 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp8Q80U87 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Usp8Q80U87 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp8Q80U87 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp8Q80U87 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp8Q80U87 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp8Q80U87 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp8Q80U87 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp8Q80U87 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Usp8Q80U87 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp8Q80U87 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.4■□□□□ 0.54
Usp8Q80U87 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.4■□□□□ 0.54
Usp8Q80U87 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.4■□□□□ 0.54
Usp8Q80U87 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.4■□□□□ 0.54
Usp8Q80U87 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp8Q80U87 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp8Q80U87 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp8Q80U87 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp8Q80U87 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp8Q80U87 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp8Q80U87 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp8Q80U87 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Usp8Q80U87 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp8Q80U87 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.39■□□□□ 0.53
Usp8Q80U87 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp8Q80U87 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Usp8Q80U87 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Usp8Q80U87 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp8Q80U87 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp8Q80U87 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.39■□□□□ 0.53
Usp8Q80U87 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp8Q80U87 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp8Q80U87 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp8Q80U87 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Usp8Q80U87 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp8Q80U87 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp8Q80U87 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp8Q80U87 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp8Q80U87 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.39■□□□□ 0.53
Usp8Q80U87 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.39■□□□□ 0.53
Usp8Q80U87 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp8Q80U87 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp8Q80U87 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp8Q80U87 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Usp8Q80U87 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp8Q80U87 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp8Q80U87 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp8Q80U87 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.38■□□□□ 0.53
Usp8Q80U87 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.38■□□□□ 0.53
Usp8Q80U87 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.38■□□□□ 0.53
Usp8Q80U87 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp8Q80U87 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp8Q80U87 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.38■□□□□ 0.53
Usp8Q80U87 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms