Protein–RNA interactions for Protein: Q7TND5

Rpf1, Ribosome production factor 1, mousemouse

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1Q7TND5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf1Q7TND5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf1Q7TND5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Rpf1Q7TND5 Gm20049-201ENSMUST00000219950 730 ntBASIC19.79■□□□□ 0.76
Rpf1Q7TND5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf1Q7TND5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rpf1Q7TND5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf1Q7TND5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf1Q7TND5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf1Q7TND5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpf1Q7TND5 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.79■□□□□ 0.76
Rpf1Q7TND5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.79■□□□□ 0.76
Rpf1Q7TND5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Gm12527-201ENSMUST00000117967 564 ntBASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpf1Q7TND5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.77■□□□□ 0.76
Rpf1Q7TND5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpf1Q7TND5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpf1Q7TND5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpf1Q7TND5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpf1Q7TND5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Rpf1Q7TND5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpf1Q7TND5 Gm22325-201ENSMUST00000158904 308 ntBASIC19.77■□□□□ 0.76
Rpf1Q7TND5 Gm27011-201ENSMUST00000182352 972 ntBASIC19.77■□□□□ 0.76
Rpf1Q7TND5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.77■□□□□ 0.76
Rpf1Q7TND5 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.77■□□□□ 0.76
Rpf1Q7TND5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.77■□□□□ 0.76
Rpf1Q7TND5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rpf1Q7TND5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Rpf1Q7TND5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Rpf1Q7TND5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rpf1Q7TND5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rpf1Q7TND5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.76■□□□□ 0.75
Rpf1Q7TND5 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.76■□□□□ 0.75
Rpf1Q7TND5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpf1Q7TND5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpf1Q7TND5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpf1Q7TND5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rpf1Q7TND5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpf1Q7TND5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.75■□□□□ 0.75
Rpf1Q7TND5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rpf1Q7TND5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rpf1Q7TND5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpf1Q7TND5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.75■□□□□ 0.75
Rpf1Q7TND5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpf1Q7TND5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.75■□□□□ 0.75
Rpf1Q7TND5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf1Q7TND5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf1Q7TND5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf1Q7TND5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf1Q7TND5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf1Q7TND5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.74■□□□□ 0.75
Rpf1Q7TND5 Gm2559-201ENSMUST00000201323 363 ntBASIC19.74■□□□□ 0.75
Rpf1Q7TND5 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.74■□□□□ 0.75
Rpf1Q7TND5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf1Q7TND5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.74■□□□□ 0.75
Rpf1Q7TND5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf1Q7TND5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rpf1Q7TND5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms