Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 Gm10602-201ENSMUST00000098239 609 ntBASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf139Q7TMV1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rnf139Q7TMV1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf139Q7TMV1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Rnf139Q7TMV1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Rnf139Q7TMV1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf139Q7TMV1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf139Q7TMV1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf139Q7TMV1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf139Q7TMV1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rnf139Q7TMV1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf139Q7TMV1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf139Q7TMV1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf139Q7TMV1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rnf139Q7TMV1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf139Q7TMV1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rnf139Q7TMV1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf139Q7TMV1 Gm26524-201ENSMUST00000192339 390 ntBASIC19.68■□□□□ 0.74
Rnf139Q7TMV1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf139Q7TMV1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf139Q7TMV1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf139Q7TMV1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rnf139Q7TMV1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf139Q7TMV1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf139Q7TMV1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf139Q7TMV1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf139Q7TMV1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rnf139Q7TMV1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rnf139Q7TMV1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf139Q7TMV1 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.67■□□□□ 0.74
Rnf139Q7TMV1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf139Q7TMV1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf139Q7TMV1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Rnf139Q7TMV1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf139Q7TMV1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf139Q7TMV1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf139Q7TMV1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf139Q7TMV1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf139Q7TMV1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf139Q7TMV1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf139Q7TMV1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf139Q7TMV1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf139Q7TMV1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf139Q7TMV1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.65■□□□□ 0.74
Rnf139Q7TMV1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf139Q7TMV1 Gm22325-201ENSMUST00000158904 308 ntBASIC19.65■□□□□ 0.74
Rnf139Q7TMV1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf139Q7TMV1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rnf139Q7TMV1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf139Q7TMV1 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.65■□□□□ 0.74
Rnf139Q7TMV1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf139Q7TMV1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf139Q7TMV1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf139Q7TMV1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.64■□□□□ 0.74
Rnf139Q7TMV1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Rnf139Q7TMV1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.64■□□□□ 0.73
Rnf139Q7TMV1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rnf139Q7TMV1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf139Q7TMV1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rnf139Q7TMV1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.64■□□□□ 0.73
Rnf139Q7TMV1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf139Q7TMV1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf139Q7TMV1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf139Q7TMV1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf139Q7TMV1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf139Q7TMV1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf139Q7TMV1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rnf139Q7TMV1 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.63■□□□□ 0.73
Rnf139Q7TMV1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf139Q7TMV1 Gm5408-201ENSMUST00000197998 747 ntBASIC19.63■□□□□ 0.73
Rnf139Q7TMV1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf139Q7TMV1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf139Q7TMV1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf139Q7TMV1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf139Q7TMV1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf139Q7TMV1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf139Q7TMV1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.63■□□□□ 0.73
Rnf139Q7TMV1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf139Q7TMV1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms