Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox11Q7M6Y2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.61■□□□□ 0.57
Sox11Q7M6Y2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox11Q7M6Y2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox11Q7M6Y2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sox11Q7M6Y2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.61■□□□□ 0.57
Sox11Q7M6Y2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Sox11Q7M6Y2 Gm9987-201ENSMUST00000069768 567 ntBASIC18.61■□□□□ 0.57
Sox11Q7M6Y2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox11Q7M6Y2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox11Q7M6Y2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox11Q7M6Y2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox11Q7M6Y2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox11Q7M6Y2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox11Q7M6Y2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.59■□□□□ 0.57
Sox11Q7M6Y2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.59■□□□□ 0.57
Sox11Q7M6Y2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox11Q7M6Y2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox11Q7M6Y2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox11Q7M6Y2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox11Q7M6Y2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox11Q7M6Y2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox11Q7M6Y2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sox11Q7M6Y2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox11Q7M6Y2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox11Q7M6Y2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sox11Q7M6Y2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox11Q7M6Y2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox11Q7M6Y2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Sox11Q7M6Y2 Mir5122-201ENSMUST00000175004 89 ntBASIC18.58■□□□□ 0.56
Sox11Q7M6Y2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox11Q7M6Y2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox11Q7M6Y2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox11Q7M6Y2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox11Q7M6Y2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sox11Q7M6Y2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox11Q7M6Y2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Gm6433-201ENSMUST00000118634 875 ntBASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox11Q7M6Y2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox11Q7M6Y2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox11Q7M6Y2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox11Q7M6Y2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox11Q7M6Y2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Sox11Q7M6Y2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.56■□□□□ 0.56
Sox11Q7M6Y2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.56■□□□□ 0.56
Sox11Q7M6Y2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.56■□□□□ 0.56
Sox11Q7M6Y2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sox11Q7M6Y2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox11Q7M6Y2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox11Q7M6Y2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sox11Q7M6Y2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox11Q7M6Y2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms